The screening mammography paradox: better when found, perhaps better not to find. D A Berry. Br J Cancer, 2008 May 29; 98(11). PMID: 18506172 Free PMC article.
|
RNA expression analysis from formalin fixed paraffin embedded tissues. Susan M Farragher, Austin Tanney, Richard D Kennedy, D Paul Harkin. Histochem Cell Biol, 2008 Aug 06; 130(3). PMID: 18679706 Review.
|
Current research topics in endocrine therapy for breast cancer. Hiroko Yamashita. Int J Clin Oncol, 2008 Oct 24; 13(5). PMID: 18946747 Review.
|
The utility of conventional and molecular pathology in managing breast cancer. D Craig Allred. Breast Cancer Res, 2009 Jan 16; 10 Suppl 4. PMID: 19128442 Free PMC article.
|
Tailoring to RB: tumour suppressor status and therapeutic response. Erik S Knudsen, Karen E Knudsen. Nat Rev Cancer, 2009 Jan 15; 8(9). PMID: 19143056 Free PMC article. Highly Cited. Review.
|
Validation study of the prognostic value of cyclin-dependent kinase (CDK)-based risk in Caucasian breast cancer patients. J G H van Nes, V T H B M Smit, +11 authors, H Putter, P J Kuppen, S J Kim, M Daito, J Ding, M Shibayama, S Numada, K Gohda, T Matsushima, H Ishihara, S Noguchi, C J H van de Velde. less Br J Cancer, 2009 Jan 22; 100(3). PMID: 19156146 Free PMC article.
|
Breast cancer subtypes and response to docetaxel in node-positive breast cancer: use of an immunohistochemical definition in the BCIRG 001 trial. Judith Hugh, John Hanson, +11 authors, Maggie Chon U Cheang, Torsten O Nielsen, Charles M Perou, Charles Dumontet, John Reed, Maryla Krajewska, Isabelle Treilleux, Matthieu Rupin, Emmanuelle Magherini, John Mackey, Miguel Martin, Charles Vogel. less J Clin Oncol, 2009 Feb 11; 27(8). PMID: 19204205 Free PMC article. Highly Cited.
|
A radiation-derived gene expression signature predicts clinical outcome for breast cancer patients. Brian D Piening, Pei Wang, Aravind Subramanian, Amanda G Paulovich. Radiat Res, 2009 Mar 10; 171(2). PMID: 19267539 Free PMC article.
|
Factors influencing the statistical power of complex data analysis protocols for molecular signature development from microarray data. Constantin F Aliferis, Alexander Statnikov, +3 authors, Ioannis Tsamardinos, Jonathan S Schildcrout, Bryan E Shepherd, Frank E Harrell. less PLoS One, 2009 Mar 18; 4(3). PMID: 19290050 Free PMC article.
|
Prediction of breast cancer metastasis by genomic profiling: where do we stand? Ulrich Pfeffer, Francesco Romeo, Douglas M Noonan, Adriana Albini. Clin Exp Metastasis, 2009 Mar 25; 26(6). PMID: 19308665 Free PMC article. Review.
|
Recent advances in systemic therapy: advances in adjuvant systemic chemotherapy of early breast cancer. Sara López-Tarruella, Miguel Martín. Breast Cancer Res, 2009 Apr 07; 11(2). PMID: 19344489 Free PMC article. Review.
|
A kernel-based integration of genome-wide data for clinical decision support. Anneleen Daemen, Olivier Gevaert, +6 authors, Fabian Ojeda, Annelies Debucquoy, Johan Ak Suykens, Christine Sempoux, Jean-Pascal Machiels, Karin Haustermans, Bart De Moor. less Genome Med, 2009 Apr 10; 1(4). PMID: 19356222 Free PMC article.
|
Recent advances in systemic therapy: new diagnostics and biological predictors of outcome in early breast cancer. Catherine Oakman, Silvia Bessi, +3 authors, Elena Zafarana, Francesca Galardi, Laura Biganzoli, Angelo Di Leo. less Breast Cancer Res, 2009 May 14; 11(2). PMID: 19435470 Free PMC article. Review.
|
Expression of ER-{alpha}36, a novel variant of estrogen receptor {alpha}, and resistance to tamoxifen treatment in breast cancer. Liang Shi, Bin Dong, +9 authors, Zhongwu Li, Yunwei Lu, Tao Ouyang, Jinfeng Li, Tianfeng Wang, Zhaoqing Fan, Tie Fan, Benyao Lin, Zhaoyi Wang, Yuntao Xie. less J Clin Oncol, 2009 Jun 03; 27(21). PMID: 19487384 Free PMC article.
|
Clinical trial designs for predictive biomarker validation: theoretical considerations and practical challenges. Sumithra J Mandrekar, Daniel J Sargent. J Clin Oncol, 2009 Jul 15; 27(24). PMID: 19597023 Free PMC article. Highly Cited.
|
Genomic advances and their impact on clinical trial design. Sumithra J Mandrekar, Daniel J Sargent. Genome Med, 2009 Jul 30; 1(7). PMID: 19638184 Free PMC article.
|
GeneSigDB--a curated database of gene expression signatures. Aedín C Culhane, Thomas Schwarzl, +8 authors, Razvan Sultana, Kermshlise C Picard, Shaita C Picard, Tim H Lu, Katherine R Franklin, Simon J French, Gerald Papenhausen, Mick Correll, John Quackenbush. less Nucleic Acids Res, 2009 Nov 26; 38(Database issue). PMID: 19934259 Free PMC article.
|
Relationship between Topoisomerase 2A RNA Expression and Recurrence after Adjuvant Chemotherapy for Breast Cancer. Joseph A Sparano, Lori J Goldstein, +12 authors, Barrett H Childs, Steven Shak, Diana Brassard, Sunil Badve, Frederick L Baehner, Roberto Bugarini, Steve Rowley, Edith Perez, Lawrence N Shulman, Silvana Martino, Nancy E Davidson, George W Sledge, Robert Gray. less Clin Cancer Res, 2009 Dec 10; 15(24). PMID: 19996222 Free PMC article.
|
Surgical oncology: why biopsying metastatic breast cancer should be routine. Anand Sharma, Tim Crook, Alastair Thompson, Carlo Palmieri. Nat Rev Clin Oncol, 2010 Feb 02; 7(2). PMID: 20118974
|
Molecular risk assessment of BIG 1-98 participants by expression profiling using RNA from archival tissue. Janine Antonov, Vlad Popovici, +9 authors, Mauro Delorenzi, Pratyaksha Wirapati, Anna Baltzer, Andrea Oberli, Beat Thürlimann, Anita Giobbie-Hurder, Giuseppe Viale, Hans Jörg Altermatt, Stefan Aebi, Rolf Jaggi. less BMC Cancer, 2010 Feb 11; 10. PMID: 20144231 Free PMC article.
|
Targeting the RB-pathway in cancer therapy. Erik S Knudsen, Jean Y J Wang. Clin Cancer Res, 2010 Feb 11; 16(4). PMID: 20145169 Free PMC article.
|
A multigene predictor of outcome in glioblastoma. Howard Colman, Li Zhang, +16 authors, Erik P Sulman, J Matthew McDonald, Nasrin Latif Shooshtari, Andreana Rivera, Sonya Popoff, Catherine L Nutt, David N Louis, J Gregory Cairncross, Mark R Gilbert, Heidi S Phillips, Minesh P Mehta, Arnab Chakravarti, Christopher E Pelloski, Krishna Bhat, Burt G Feuerstein, Robert B Jenkins, Ken Aldape. less Neuro Oncol, 2010 Feb 13; 12(1). PMID: 20150367 Free PMC article. Highly Cited.
|
A fuzzy gene expression-based computational approach improves breast cancer prognostication. Benjamin Haibe-Kains, Christine Desmedt, +3 authors, Françoise Rothé, Martine Piccart, Christos Sotiriou, Gianluca Bontempi. less Genome Biol, 2010 Feb 17; 11(2). PMID: 20156340 Free PMC article.
|
Gene expression-based prognostic signatures in lung cancer: ready for clinical use? Jyothi Subramanian, Richard Simon. J Natl Cancer Inst, 2010 Mar 18; 102(7). PMID: 20233996 Free PMC article. Highly Cited. Review.
|
Clinical trial designs for evaluating the medical utility of prognostic and predictive biomarkers in oncology. Richard Simon. Per Med, 2010 Apr 13; 7(1). PMID: 20383292 Free PMC article.
|
Predictive biomarker validation in practice: lessons from real trials. Sumithra J Mandrekar, Daniel J Sargent. Clin Trials, 2010 Apr 16; 7(5). PMID: 20392785 Free PMC article.
|
Review of the clinical studies using the 21-gene assay. Catherine M Kelly, Ellen Warner, +2 authors, Daphne T Tsoi, Sunil Verma, Kathleen I Pritchard. less Oncologist, 2010 Apr 28; 15(5). PMID: 20421266 Free PMC article. Review.
|
What should physicians look for in evaluating prognostic gene-expression signatures? Jyothi Subramanian, Richard Simon. Nat Rev Clin Oncol, 2010 Apr 28; 7(6). PMID: 20421890 Review.
|
Translating research into evidence-based practice: the National Cancer Institute Community Clinical Oncology Program. Lori M Minasian, William R Carpenter, +7 authors, Bryan J Weiner, Darrell E Anderson, Worta McCaskill-Stevens, Stefanie Nelson, Cynthia Whitman, Joseph Kelaghan, Ann M O'Mara, Arnold D Kaluzny. less Cancer, 2010 Jun 24; 116(19). PMID: 20572032 Free PMC article. Review.
|
BCL2 in breast cancer: a favourable prognostic marker across molecular subtypes and independent of adjuvant therapy received. S-J Dawson, N Makretsov, +17 authors, F M Blows, K E Driver, E Provenzano, J Le Quesne, L Baglietto, G Severi, G G Giles, C A McLean, G Callagy, A R Green, I Ellis, K Gelmon, G Turashvili, S Leung, S Aparicio, D Huntsman, C Caldas, P Pharoah. less Br J Cancer, 2010 Jul 29; 103(5). PMID: 20664598 Free PMC article. Highly Cited.
|
Gene-expression profiling in breast cancer: bespoke cancer therapy or more fiction than science? M Barry, M R Kell. Ir J Med Sci, 2010 Sep 03; 179(4). PMID: 20809382
|
Breast cancer in the personal genomics era. Rachel E Ellsworth, David J Decewicz, Craig D Shriver, Darrell L Ellsworth. Curr Genomics, 2010 Nov 03; 11(3). PMID: 21037853 Free PMC article.
|
Node-Negative Breast Cancer: Which Patients Should Be Treated? Marcus Schmidt. Breast Care (Basel), 2008 Jan 01; 3(4). PMID: 21076603 Free PMC article.
|
In silico ascription of gene expression differences to tumor and stromal cells in a model to study impact on breast cancer outcome. Simen Myhre, Hayat Mohammed, +7 authors, Trine Tramm, Jan Alsner, Greg Finak, Morag Park, Jens Overgaard, Anne-Lise Børresen-Dale, Arnoldo Frigessi, Therese Sørlie. less PLoS One, 2010 Dec 03; 5(11). PMID: 21124964 Free PMC article.
|
Differential efficacy of three cycles of CMF followed by tamoxifen in patients with ER-positive and ER-negative tumors: long-term follow up on IBCSG Trial IX. S Aebi, Z Sun, +14 authors, D Braun, K N Price, M Castiglione-Gertsch, M Rabaglio, R D Gelber, D Crivellari, J Lindtner, R Snyder, P Karlsson, E Simoncini, B A Gusterson, G Viale, M M Regan, A S Coates, A Goldhirsch. less Ann Oncol, 2011 Feb 02; 22(9). PMID: 21282282 Free PMC article.
|
Can some patients avoid adjuvant chemotherapy for early-stage breast cancer? Philippe L Bedard, Fatima Cardoso. Nat Rev Clin Oncol, 2011 Mar 03; 8(5). PMID: 21364525 Review.
|
Mass spectrometric characterization of protein structure details refines the proteome signature for invasive ductal breast carcinoma. Claudia Röwer, Cornelia Koy, +4 authors, Michael Hecker, Toralf Reimer, Bernd Gerber, Hans-Jürgen Thiesen, Michael O Glocker. less J Am Soc Mass Spectrom, 2011 Apr 08; 22(3). PMID: 21472563
|
Expanding the understanding of biases in development of clinical-grade molecular signatures: a case study in acute respiratory viral infections. Nikita I Lytkin, Lauren McVoy, +2 authors, Jörn-Hendrik Weitkamp, Constantin F Aliferis, Alexander Statnikov. less PLoS One, 2011 Jun 16; 6(6). PMID: 21673802 Free PMC article.
|
The changing role of pathology in breast cancer diagnosis and treatment. Anthony S-Y Leong, Zhengping Zhuang. Pathobiology, 2011 Jun 17; 78(2). PMID: 21677473 Free PMC article. Review.
|
Microarrays in the 2010s: the contribution of microarray-based gene expression profiling to breast cancer classification, prognostication and prediction. Pierre-Emmanuel Colombo, Fernanda Milanezi, Britta Weigelt, Jorge S Reis-Filho. Breast Cancer Res, 2011 Jul 27; 13(3). PMID: 21787441 Free PMC article. Review.
|
Targeting Rb inactivation in cancers by synthetic lethality. Gabriel M Gordon, Wei Du. Am J Cancer Res, 2011 Aug 05; 1(6). PMID: 21814623 Free PMC article.
|
A five-gene model predicts clinical outcome in ER+/PR+, early-stage breast cancers treated with adjuvant tamoxifen. Daniel Alan Kerr, James L Wittliff. Horm Cancer, 2011 Aug 10; 2(5). PMID: 21826535
|
Activation-induced cytidine deaminase (AID)-associated multigene signature to assess impact of AID in etiology of diseases with inflammatory component. Diana Mechtcheriakova, Yury Sobanov, +5 authors, Gabriele Holtappels, Erika Bajna, Martin Svoboda, Markus Jaritz, Claus Bachert, Erika Jensen-Jarolim. less PLoS One, 2011 Oct 11; 6(10). PMID: 21984922 Free PMC article.
|
Prognostic gene expression signature associated with two molecularly distinct subtypes of colorectal cancer. Sang Cheul Oh, Yun-Yong Park, +11 authors, Eun Sung Park, Jae Yun Lim, Soo Mi Kim, Sang-Bae Kim, Jongseung Kim, Sang Cheol Kim, In-Sun Chu, J Joshua Smith, R Daniel Beauchamp, Timothy J Yeatman, Scott Kopetz, Ju-Seog Lee. less Gut, 2011 Oct 15; 61(9). PMID: 21997556 Free PMC article.
|
Quantitative copy number analysis by Multiplex Ligation-dependent Probe Amplification (MLPA) of BRCA1-associated breast cancer regions identifies BRCAness. Esther H Lips, Nadja Laddach, +7 authors, Suvi P Savola, Marieke A Vollebergh, Anne M M Oonk, Alex L T Imholz, Lodewyk F A Wessels, Jelle Wesseling, Petra M Nederlof, Sjoerd Rodenhuis. less Breast Cancer Res, 2011 Oct 29; 13(5). PMID: 22032731 Free PMC article.
|
Clinical trials in the era of personalized oncology. Michael L Maitland, Richard L Schilsky. CA Cancer J Clin, 2011 Oct 29; 61(6). PMID: 22034206 Free PMC article.
|
Biologic characteristics of premalignant breast disease. Kimberly Cole, Maria Tabernero, Karen S Anderson. Cancer Biomark, 2011 Nov 25; 9(1-6). PMID: 22112476 Free PMC article.
|
Practical implications of gene-expression-based assays for breast oncologists. Aleix Prat, Matthew J Ellis, Charles M Perou. Nat Rev Clin Oncol, 2011 Dec 07; 9(1). PMID: 22143140 Free PMC article. Highly Cited. Review.
|
Improving validation practices in "omics" research. John P A Ioannidis, Muin J Khoury. Science, 2011 Dec 07; 334(6060). PMID: 22144616 Free PMC article.
|
A prognostic gene expression signature in infratentorial ependymoma. Khalida Wani, Terri S Armstrong, +18 authors, Elizabeth Vera-Bolanos, Aditya Raghunathan, David Ellison, Richard Gilbertson, Brian Vaillant, Stewart Goldman, Roger J Packer, Maryam Fouladi, Ian Pollack, Tom Mikkelsen, Michael Prados, Antonio Omuro, Riccardo Soffietti, Alicia Ledoux, Charmaine Wilson, Lihong Long, Mark R Gilbert, Ken Aldape, Collaborative Ependymoma Research Network. less Acta Neuropathol, 2012 Feb 11; 123(5). PMID: 22322993 Free PMC article.
|
Decentral gene expression analysis for ER+/Her2- breast cancer: results of a proficiency testing program for the EndoPredict assay. Carsten Denkert, Ralf Kronenwett, +23 authors, Werner Schlake, Kerstin Bohmann, Roland Penzel, Karsten E Weber, Heinz Höfler, Ulrich Lehmann, Peter Schirmacher, Katja Specht, Margaretha Rudas, Hans-Heinrich Kreipe, Peter Schraml, Gudrun Schlake, Zsuzsanna Bago-Horvath, Frank Tiecke, Zsuzsanna Varga, Holger Moch, Marcus Schmidt, Judith Prinzler, Dontscho Kerjaschki, Bruno Valentin Sinn, Berit Maria Müller, Martin Filipits, Christoph Petry, Manfred Dietel. less Virchows Arch, 2012 Mar 01; 460(3). PMID: 22371223 Free PMC article.
|
Design of clinical trials for biomarker research in oncology. Sumithra J Mandrekar, Daniel J Sargent. Clin Investig (Lond), 2012 Mar 06; 1(12). PMID: 22389760 Free PMC article.
|
ER and HER2 expression are positively correlated in HER2 non-overexpressing breast cancer. Isabel Pinhel, Margaret Hills, +10 authors, Suzanne Drury, Janine Salter, Georges Sumo, Roger A'Hern, Judith M Bliss, Ivana Sestak, Jack Cuzick, Peter Barrett-Lee, Adrian Harris, Mitch Dowsett, NCRI Adjuvant Breast Cancer Trial Management Group. less Breast Cancer Res, 2012 Mar 16; 14(2). PMID: 22417870 Free PMC article.
|
Activation-induced cytidine deaminase (AID) linking immunity, chronic inflammation, and cancer. Diana Mechtcheriakova, Martin Svoboda, Anastasia Meshcheryakova, Erika Jensen-Jarolim. Cancer Immunol Immunother, 2012 Apr 25; 61(9). PMID: 22527246 Free PMC article. Review.
|
Concordance among gene expression-based predictors for ER-positive breast cancer treated with adjuvant tamoxifen. A Prat, J S Parker, +9 authors, C Fan, M C U Cheang, L D Miller, J Bergh, S K L Chia, P S Bernard, T O Nielsen, M J Ellis, L A Carey, C M Perou. less Ann Oncol, 2012 Apr 26; 23(11). PMID: 22532584 Free PMC article.
|
TOP2A RNA expression and recurrence in estrogen receptor-positive breast cancer. Joseph A Sparano, Lori J Goldstein, +2 authors, Nancy E Davidson, George W Sledge, Robert Gray. less Breast Cancer Res Treat, 2012 Jun 19; 134(2). PMID: 22706628 Free PMC article.
|
Predicting the response to preoperative radiation or chemoradiation by a microarray analysis of the gene expression profiles in rectal cancer. Takashi Akiyoshi, Takashi Kobunai, Toshiaki Watanabe. Surg Today, 2012 Jun 19; 42(8). PMID: 22706722 Review.
|
Why does Oncotype DX recurrence score reduce adjuvant chemotherapy use? Jeffrey G Schneider, Danny N Khalil. Breast Cancer Res Treat, 2012 Jun 23; 134(3). PMID: 22723033 Free PMC article.
|
Understanding how breast cancer patients use risk information from genomic tests. Jessica T DeFrank, Lisa A Carey, Noel T Brewer. J Behav Med, 2012 Aug 11; 36(6). PMID: 22878783 Free PMC article.
|
Psychosocial and Quality of Life in Women Receiving the 21-Gene Recurrence Score Assay: The Impact of Decision Style in Women with Intermediate RS. Nadiyah Sulayman, Elizabeth Spellman, +4 authors, Kristi D Graves, Beth N Peshkin, Claudine Isaacs, Marc D Schwartz, Suzanne C O'Neill. less J Cancer Epidemiol, 2012 Aug 18; 2012. PMID: 22899924 Free PMC article.
|
Gene-expression profiling of microdissected breast cancer microvasculature identifies distinct tumor vascular subtypes. François Pepin, Nicholas Bertos, +7 authors, Julie Laferrière, Svetlana Sadekova, Margarita Souleimanova, Hong Zhao, Greg Finak, Sarkis Meterissian, Michael T Hallett, Morag Park. less Breast Cancer Res, 2012 Aug 22; 14(4). PMID: 22906178 Free PMC article.
|
Study designs and statistical analyses for biomarker research. Masahiko Gosho, Kengo Nagashima, Yasunori Sato. Sensors (Basel), 2012 Sep 27; 12(7). PMID: 23012528 Free PMC article. Review.
|
Publication of tumor marker research results: the necessity for complete and transparent reporting. Lisa M McShane, Daniel F Hayes. J Clin Oncol, 2012 Oct 17; 30(34). PMID: 23071235 Free PMC article. Review.
|
Pathway index models for construction of patient-specific risk profiles. Kevin H Eng, Sijian Wang, +2 authors, William H Bradley, Janet S Rader, Christina Kendziorski. less Stat Med, 2012 Oct 18; 32(9). PMID: 23074142 Free PMC article.
|
Systematic evaluation of medium-throughput mRNA abundance platforms. Stephenie D Prokopec, John D Watson, +5 authors, Daryl M Waggott, Ashley B Smith, Alexander H Wu, Allan B Okey, Raimo Pohjanvirta, Paul C Boutros. less RNA, 2012 Nov 22; 19(1). PMID: 23169800 Free PMC article.
|
A systematic evaluation of multi-gene predictors for the pathological response of breast cancer patients to chemotherapy. Kui Shen, Nan Song, +6 authors, Youngchul Kim, Chunqiao Tian, Shara D Rice, Michael J Gabrin, W Fraser Symmans, Lajos Pusztai, Jae K Lee. less PLoS One, 2012 Nov 28; 7(11). PMID: 23185353 Free PMC article.
|
Moving from correlative science to predictive oncology. Richard Simon. EPMA J, 2010 Sep 01; 1(3). PMID: 23199082 Free PMC article.
|
Prediction and prognosis: impact of gene expression profiling in personalized treatment of breast cancer patients. Michael R Mallmann, Andrea Staratschek-Jox, +5 authors, Christian Rudlowski, Michael Braun, Andrea Gaarz, Matthias Wolfgarten, Walther Kuhn, Joachim L Schultze. less EPMA J, 2010 Sep 01; 1(3). PMID: 23199086 Free PMC article.
|
Clinical and multiple gene expression variables in survival analysis of breast cancer: analysis with the hypertabastic survival model. Mohammad A Tabatabai, Wayne M Eby, +2 authors, Nadim Nimeh, Hong Li, Karan P Singh. less BMC Med Genomics, 2012 Dec 18; 5. PMID: 23241496 Free PMC article.
|
Cutoff Finder: a comprehensive and straightforward Web application enabling rapid biomarker cutoff optimization. Jan Budczies, Frederick Klauschen, +4 authors, Bruno V Sinn, Balázs Győrffy, Wolfgang D Schmitt, Silvia Darb-Esfahani, Carsten Denkert. less PLoS One, 2012 Dec 20; 7(12). PMID: 23251644 Free PMC article. Highly Cited.
|
14-3-3ζ as a predictor of early time to recurrence and distant metastasis in hormone receptor-positive and -negative breast cancers. Anna Bergamaschi, Jonna Frasor, +5 authors, Kristina Borgen, Adina Stanculescu, Patricia Johnson, Kendrith Rowland, Elizabeth L Wiley, Benita S Katzenellenbogen. less Breast Cancer Res Treat, 2012 Dec 29; 137(3). PMID: 23271328 Free PMC article.
|
Validation of ovarian cancer gene expression signatures for survival and subtype in formalin fixed paraffin embedded tissues. Gregory P Sfakianos, Edwin S Iversen, +5 authors, Regina Whitaker, Liudmila Akushevich, Joellen M Schildkraut, Susan K Murphy, Jeffrey R Marks, Andrew Berchuck. less Gynecol Oncol, 2013 Jan 01; 129(1). PMID: 23274563 Free PMC article.
|
Engaging in health behaviors to lower risk for breast cancer recurrence. Suzanne C O'Neill, Jessica T DeFrank, +4 authors, Patti Vegella, Alice R Richman, Leonard R Henry, Lisa A Carey, Noel T Brewer. less PLoS One, 2013 Jan 18; 8(1). PMID: 23326466 Free PMC article.
|
Transcriptional shift identifies a set of genes driving breast cancer chemoresistance. Laura Vera-Ramirez, Pedro Sanchez-Rovira, +3 authors, Cesar L Ramirez-Tortosa, Jose L Quiles, McArmen Ramirez-Tortosa, Jose A Lorente. less PLoS One, 2013 Jan 18; 8(1). PMID: 23326553 Free PMC article.
|
Gene expression signatures that predict outcome of tamoxifen-treated estrogen receptor-positive, high-risk, primary breast cancer patients: a DBCG study. Maria B Lyng, Anne-Vibeke Lænkholm, +4 authors, Qihua Tan, Werner Vach, Karina H Gravgaard, Ann Knoop, Henrik J Ditzel. less PLoS One, 2013 Jan 24; 8(1). PMID: 23342080 Free PMC article.
|
A new genome-driven integrated classification of breast cancer and its implications. Sarah-Jane Dawson, Oscar M Rueda, Samuel Aparicio, Carlos Caldas. EMBO J, 2013 Feb 12; 32(5). PMID: 23395906 Free PMC article. Highly Cited. Review.
|
Risk assessment, disease prevention and personalised treatments in breast cancer: is clinically qualified integrative approach in the horizon? Olga Golubnitschaja, Kristina Yeghiazaryan, +5 authors, Vincenzo Costigliola, Daniela Trog, Michael Braun, Manuel Debald, Walther Kuhn, Hans H Schild. less EPMA J, 2013 Feb 20; 4(1). PMID: 23418957 Free PMC article.
|
Conveying genomic recurrence risk estimates to patients with early-stage breast cancer: oncologist perspectives. Elizabeth Spellman, Nadiyah Sulayman, +4 authors, Susan Eggly, Beth N Peshkin, Claudine Isaacs, Marc D Schwartz, Suzanne C O'Neill. less Psychooncology, 2013 Mar 01; 22(9). PMID: 23447452 Free PMC article.
|
Ki-67 is a prognostic parameter in breast cancer patients: results of a large population-based cohort of a cancer registry. E C Inwald, M Klinkhammer-Schalke, +4 authors, F Hofstädter, F Zeman, M Koller, M Gerstenhauer, O Ortmann. less Breast Cancer Res Treat, 2013 May 16; 139(2). PMID: 23674192 Free PMC article. Highly Cited.
|
Lactate dehydrogenase B: a metabolic marker of response to neoadjuvant chemotherapy in breast cancer. Jennifer B Dennison, Jennifer R Molina, +9 authors, Shreya Mitra, Ana M González-Angulo, Justin M Balko, María G Kuba, Melinda E Sanders, Joseph A Pinto, Henry L Gómez, Carlos L Arteaga, Robert E Brown, Gordon B Mills. less Clin Cancer Res, 2013 May 24; 19(13). PMID: 23697991 Free PMC article.
|
In situ sequencing for RNA analysis in preserved tissue and cells. Rongqin Ke, Marco Mignardi, +4 authors, Alexandra Pacureanu, Jessica Svedlund, Johan Botling, Carolina Wählby, Mats Nilsson. less Nat Methods, 2013 Jul 16; 10(9). PMID: 23852452 Highly Cited.
|
Who gets genomic testing for breast cancer recurrence risk? J T DeFrank, T Salz, K Reeder-Hayes, N T Brewer. Public Health Genomics, 2013 Aug 01; 16(5). PMID: 23899493 Free PMC article.
|
[Gene expression analysis in breast cancer. A new diagnostic tool in pathology]. C Denkert. Pathologe, 2013 Aug 13; 34(5). PMID: 23934410 Review.
|
The impact of the Oncotype Dx breast cancer assay in clinical practice: a systematic review and meta-analysis. Josh J Carlson, Joshua A Roth. Breast Cancer Res Treat, 2013 Aug 27; 141(1). PMID: 23974828 Free PMC article. Highly Cited. Systematic Review.
|
Genomic Grade Index (GGI): feasibility in routine practice and impact on treatment decisions in early breast cancer. Otto Metzger-Filho, Aurélie Catteau, +21 authors, Stefan Michiels, Marc Buyse, Michail Ignatiadis, Kamal S Saini, Evandro de Azambuja, Virginie Fasolo, Sihem Naji, Jean Luc Canon, Paul Delrée, Michel Coibion, Pino Cusumano, Veronique Jossa, Jean Pierre Kains, Denis Larsimont, Vincent Richard, Daniel Faverly, Nathalie Cornez, Peter Vuylsteke, Brigitte Vanderschueren, Hélène Peyro-Saint-Paul, Martine Piccart, Christos Sotiriou. less PLoS One, 2013 Aug 31; 8(8). PMID: 23990869 Free PMC article.
|
Effect of chemotherapy for luminal a breast cancer. Naotaka Uchida, Takako Suda, Kiyosuke Ishiguro. Yonago Acta Med, 2013 Sep 14; 56(2). PMID: 24031152 Free PMC article.
|
Towards the integration, annotation and association of historical microarray experiments with RNA-seq. Shweta S Chavan, Michael A Bauer, +2 authors, Erich A Peterson, Christoph J Heuck, Donald J Johann. less BMC Bioinformatics, 2013 Dec 07; 14 Suppl 14. PMID: 24268045 Free PMC article.
|
Breast Cancer Biomarkers: Utility in Clinical Practice. Fanny Le Du, Naoto T Ueno, Ana M Gonzalez-Angulo. Curr Breast Cancer Rep, 2014 Jan 15; 5(4). PMID: 24416469 Free PMC article.
|
Neoadjuvant endocrine treatment for breast cancer: from bedside to bench and back again? R R Saleh, N Bouganim, +2 authors, J Hilton, A Arnaout, M Clemons. less Curr Oncol, 2014 Feb 14; 21(1). PMID: 24523609 Free PMC article.
|
Systematic assessment of prognostic gene signatures for breast cancer shows distinct influence of time and ER status. Xi Zhao, Einar Andreas Rødland, +5 authors, Therese Sørlie, Hans Kristian Moen Vollan, Hege G Russnes, Vessela N Kristensen, Ole Christian Lingjærde, Anne-Lise Børresen-Dale. less BMC Cancer, 2014 Mar 22; 14. PMID: 24645668 Free PMC article.
|
Collagen gel droplet-embedded culture-drug sensitivity test and Ki67 expression in estrogen receptor-positive and HER2-negative breast cancer. Katsunori Tozuka, Jun Horiguchi, +7 authors, Daisuke Takata, Nana Rokutanda, Rin Nagaoka, Hideaki Tokiniwa, Mami Kikuchi, Ayako Satou, Hiroyuki Takei, Izumi Takeyoshi. less Mol Clin Oncol, 2013 Jan 01; 1(1). PMID: 24649129 Free PMC article.
|
Patients' perceptions of gene expression profiling in breast cancer treatment decisions. Y Bombard, L Rozmovits, +3 authors, M E Trudeau, N B Leighl, K Deal, D A Marshall. less Curr Oncol, 2014 Apr 26; 21(2). PMID: 24764705 Free PMC article.
|
Multigene Assays for Classification, Prognosis, and Prediction in Breast Cancer: a Critical Review on the Background and Clinical Utility. P Sinn, S Aulmann, +6 authors, R Wirtz, S Schott, F Marmé, Z Varga, A Lebeau, H Kreipe, A Schneeweiss. less Geburtshilfe Frauenheilkd, 2014 Apr 29; 73(9). PMID: 24771945 Free PMC article.
|
Subtype-dependent prognostic relevance of an interferon-induced pathway metagene in node-negative breast cancer. Maurizio Callari, Valeria Musella, +9 authors, Eleonora Di Buduo, Marialuisa Sensi, Patrizia Miodini, Matteo Dugo, Rosaria Orlandi, Roberto Agresti, Biagio Paolini, Maria Luisa Carcangiu, Vera Cappelletti, Maria Grazia Daidone. less Mol Oncol, 2014 May 24; 8(7). PMID: 24853384 Free PMC article.
|
Determination of the HER2 amplification status by in situ fluorescent hybridization and concordance with immunohistochemistry for breast cancer samples in Colombia. Adriana Plata, Maria Mercedes Torres, Rocío López, Rafael E Andrade. Colomb Med (Cali), 2013 Apr 01; 44(2). PMID: 24892456 Free PMC article.
|
Biological subtypes of breast cancer: Prognostic and therapeutic implications. Ozlem Yersal, Sabri Barutca. World J Clin Oncol, 2014 Aug 13; 5(3). PMID: 25114856 Free PMC article. Highly Cited. Review.
|
A tumor DNA complex aberration index is an independent predictor of survival in breast and ovarian cancer. Hans Kristian Moen Vollan, Oscar M Rueda, +22 authors, Suet-Feung Chin, Christina Curtis, Gulisa Turashvili, Sohrab Shah, Ole Christian Lingjærde, Yinyin Yuan, Charlotte K Ng, Mark J Dunning, Ed Dicks, Elena Provenzano, Stephen Sammut, Steven McKinney, Ian O Ellis, Sarah Pinder, Arnie Purushotham, Leigh C Murphy, Vessela N Kristensen, METABRIC Group, James D Brenton, Paul D P Pharoah, Anne-Lise Børresen-Dale, Samuel Aparicio, Carlos Caldas. less Mol Oncol, 2014 Aug 30; 9(1). PMID: 25169931 Free PMC article.
|
A generic cycling hypoxia-derived prognostic gene signature: application to breast cancer profiling. Romain Boidot, Samuel Branders, +3 authors, Thibault Helleputte, Laila Illan Rubio, Pierre Dupont, Olivier Feron. less Oncotarget, 2014 Sep 13; 5(16). PMID: 25216520 Free PMC article.
|
The 21-gene recurrence score and locoregional recurrence in breast cancer patients. Naresh K Jegadeesh, Sunjin Kim, +7 authors, Roshan S Prabhu, Gabriela M Oprea, David S Yu, Karen G Godette, Amelia B Zelnak, Donna Mister, Jeffrey M Switchenko, Mylin A Torres. less Ann Surg Oncol, 2014 Dec 05; 22(4). PMID: 25472643 Free PMC article.
|
Landscape of neoadjuvant therapy for breast cancer. Tufia C Haddad, Matthew P Goetz. Ann Surg Oncol, 2015 Mar 03; 22(5). PMID: 25727557 Free PMC article. Review.
|
Prognostic value of a 92-probe signature in breast cancer. Salima Akter, Tae Gyu Choi, +17 authors, Minh Nam Nguyen, Abel Matondo, Jin-Hwan Kim, Yong Hwa Jo, Ara Jo, Muhammad Shahid, Dae Young Jun, Ji Youn Yoo, Ngoc Ngo Yen Nguyen, Seong-Wook Seo, Liaquat Ali, Ju-Seog Lee, Kyung-Sik Yoon, Wonchae Choe, Insug Kang, Joohun Ha, Jayoung Kim, Sung Soo Kim. less Oncotarget, 2015 Apr 18; 6(17). PMID: 25883221 Free PMC article.
|
Use of modified Magee equations and histologic criteria to predict the Oncotype DX recurrence score. Bradley M Turner, Kristin A Skinner, +6 authors, Ping Tang, Mary C Jackson, Nyrie Soukiazian, Michelle Shayne, Alissa Huston, Marilyn Ling, David G Hicks. less Mod Pathol, 2015 May 02; 28(7). PMID: 25932962
|
Effect of 21-Gene RT-PCR Assay on Adjuvant Therapy and Outcomes in Patients With Stage I Breast Cancer. Fanny Le Du, Ana M Gonzalez-Angulo, +3 authors, Minjeong Park, Diane D Liu, Gabriel N Hortobagyi, Naoto T Ueno. less Clin Breast Cancer, 2015 Aug 04; 15(6). PMID: 26233757 Free PMC article.
|
Is There a Role for Oncotype Dx Testing in Invasive Lobular Carcinoma? Niamh Conlon, Dara S Ross, +3 authors, Jane Howard, Jeffrey P Catalano, Maura N Dickler, Lee K Tan. less Breast J, 2015 Aug 15; 21(5). PMID: 26271749 Free PMC article.
|
Progress in adjuvant chemotherapy for breast cancer: an overview. Jesus Anampa, Della Makower, Joseph A Sparano. BMC Med, 2015 Aug 19; 13. PMID: 26278220 Free PMC article. Highly Cited. Review.
|
Biological and Clinical Significance of MAD2L1 and BUB1, Genes Frequently Appearing in Expression Signatures for Breast Cancer Prognosis. Zhanwei Wang, Dionyssios Katsaros, +7 authors, Yi Shen, Yuanyuan Fu, Emilie Marion Canuto, Chiara Benedetto, Lingeng Lu, Wen-Ming Chu, Harvey A Risch, Herbert Yu. less PLoS One, 2015 Aug 20; 10(8). PMID: 26287798 Free PMC article.
|
4-IHC classification of breast cancer subtypes in a large cohort of a clinical cancer registry: use in clinical routine for therapeutic decisions and its effect on survival. Elisabeth Christine Inwald, M Koller, +5 authors, M Klinkhammer-Schalke, F Zeman, F Hofstädter, M Gerstenhauer, G Brockhoff, O Ortmann. less Breast Cancer Res Treat, 2015 Sep 16; 153(3). PMID: 26369534 Free PMC article.
|
Prospective Validation of a 21-Gene Expression Assay in Breast Cancer. Joseph A Sparano, Robert J Gray, +28 authors, Della F Makower, Kathleen I Pritchard, Kathy S Albain, Daniel F Hayes, Charles E Geyer, Elizabeth C Dees, Edith A Perez, John A Olson, JoAnne Zujewski, Tracy Lively, Sunil S Badve, Thomas J Saphner, Lynne I Wagner, Timothy J Whelan, Matthew J Ellis, Soonmyung Paik, William C Wood, Peter Ravdin, Maccon M Keane, Henry L Gomez Moreno, Pavan S Reddy, Timothy F Goggins, Ingrid A Mayer, Adam M Brufsky, Deborah L Toppmeyer, Virginia G Kaklamani, James N Atkins, Jeffrey L Berenberg, George W Sledge. less N Engl J Med, 2015 Sep 29; 373(21). PMID: 26412349 Free PMC article. Highly Cited.
|
Immunohistochemical subtypes predict the clinical outcome in high-risk node-negative breast cancer patients treated with adjuvant FEC regimen: results of a single-center retrospective study. S Rahal, J M Boher, +12 authors, J M Extra, C Tarpin, E Charafe-Jauffret, E Lambaudie, R Sabatier, J Thomassin-Piana, A Tallet, M Resbeut, G Houvenaeghel, L Laborde, F Bertucci, P Viens, A Gonçalves. less BMC Cancer, 2015 Oct 16; 15. PMID: 26466893 Free PMC article.
|
Molecular subclasses of hepatocellular carcinoma predict sensitivity to fibroblast growth factor receptor inhibition. Benjamin Schmidt, Lan Wei, +7 authors, Danielle K DePeralta, Yujin Hoshida, Poh Seng Tan, Xiaochen Sun, Janelle P Sventek, Michael Lanuti, Kenneth K Tanabe, Bryan C Fuchs. less Int J Cancer, 2015 Oct 21; 138(6). PMID: 26481559 Free PMC article.
|
Adoption of Gene Expression Profiling for Breast Cancer in US Oncology Practice for Women Younger Than 65 Years. Suzanne C O'Neill, Claudine Isaacs, +8 authors, Calvin Chao, Huei-Ting Tsai, Chunfu Liu, Bola F Ekezue, Nandini Selvam, Larry G Kessler, Marc D Schwartz, Tania Lobo, Arnold L Potosky. less J Natl Compr Canc Netw, 2015 Oct 21; 13(10). PMID: 26483061 Free PMC article.
|
Biomarkers in Breast Cancer - An Update. M Schmidt, P A Fasching, M W Beckmann, H Kölbl. Geburtshilfe Frauenheilkd, 2012 Sep 01; 72(9). PMID: 26640290 Free PMC article.
|
Overcoming Resistance to Endocrine Therapy in Breast Cancer: New Approaches to a Nagging Problem. Yunus A Luqmani, Nada Alam-Eldin. Med Princ Pract, 2016 Feb 06; 25 Suppl 2. PMID: 26849149 Free PMC article. Review.
|
21-Gene Recurrence Score Assay As a Predictor of Adjuvant Chemotherapy Administration for Early-Stage Breast Cancer: An Analysis of Use, Therapeutic Implications, and Disparity Profile. Jagar Jasem, Arya Amini, +4 authors, Rachel Rabinovitch, Virginia F Borges, Anthony Elias, Christine M Fisher, Peter Kabos. less J Clin Oncol, 2016 Mar 24; 34(17). PMID: 27001563 Free PMC article.
|
Underutilization of gene expression profiling for early-stage breast cancer in California. Rosemary D Cress, Yingjia S Chen, +2 authors, Cyllene R Morris, Helen Chew, Kenneth W Kizer. less Cancer Causes Control, 2016 Apr 22; 27(6). PMID: 27097910 Free PMC article.
|
Identification of breast cancer candidate genes using gene co-expression and protein-protein interaction information. Zhenyu Yue, Hai-Tao Li, +4 authors, Yabing Yang, Sajid Hussain, Chun-Hou Zheng, Junfeng Xia, Yan Chen. less Oncotarget, 2016 May 07; 7(24). PMID: 27150055 Free PMC article.
|
Utilization and impact of 21-gene recurrence score assay for breast cancer in clinical practice across the United States: lessons learned from the 2010 to 2012 National Cancer Data Base analysis. Amila Orucevic, Robert E Heidel, John L Bell. Breast Cancer Res Treat, 2016 May 22; 157(3). PMID: 27206678 Free PMC article.
|
Fourth Generation of Next-Generation Sequencing Technologies: Promise and Consequences. Rongqin Ke, Marco Mignardi, Thomas Hauling, Mats Nilsson. Hum Mutat, 2016 Jul 14; 37(12). PMID: 27406789 Free PMC article. Review.
|
Defining the transcriptional and biological response to CDK4/6 inhibition in relation to ER+/HER2- breast cancer. Erik S Knudsen, Agnieszka K Witkiewicz. Oncotarget, 2016 Aug 27; 7(43). PMID: 27564114 Free PMC article.
|
Optimizing the Use of Gene Expression Profiling in Early-Stage Breast Cancer. Hyun-Seok Kim, Christopher B Umbricht, +22 authors, Peter B Illei, Ashley Cimino-Mathews, Soonweng Cho, Nivedita Chowdhury, Maria Cristina Figueroa-Magalhaes, Catherine Pesce, Stacie C Jeter, Charles Mylander, Martin Rosman, Lorraine Tafra, Bradley M Turner, David G Hicks, Tyler A Jensen, Dylan V Miller, Deborah K Armstrong, Roisin M Connolly, John H Fetting, Robert S Miller, Ben Ho Park, Vered Stearns, Kala Visvanathan, Antonio C Wolff, Leslie Cope. less J Clin Oncol, 2016 Dec 22; 34(36). PMID: 27998227 Free PMC article.
|
Biomarker-Guided Non-Adaptive Trial Designs in Phase II and Phase III: A Methodological Review. Miranta Antoniou, Ruwanthi Kolamunnage-Dona, Andrea L Jorgensen. J Pers Med, 2017 Jan 27; 7(1). PMID: 28125057 Free PMC article. Review.
|
Outcomes in patients with early-stage breast cancer who underwent a 21-gene expression assay. Carlos H Barcenas, Akshara Raghavendra, +10 authors, Arup K Sinha, Masood Pasha Syed, Limin Hsu, Modesto G Patangan, Mariana Chavez-MacGregor, Yu Shen, Gabriel H Hortobagyi, Vicente Valero, Sharon H Giordano, Naoto T Ueno, Debu Tripathy. less Cancer, 2017 Feb 16; 123(13). PMID: 28199747 Free PMC article.
|
Using the 21-gene assay from core needle biopsies to choose neoadjuvant therapy for breast cancer: A multicenter trial. Harry D Bear, Wen Wan, +8 authors, André Robidoux, Peter Rubin, Steven Limentani, Richard L White, James Granfortuna, Judith O Hopkins, Dwight Oldham, Angel Rodriguez, Amy P Sing. less J Surg Oncol, 2017 Apr 14; 115(8). PMID: 28407247 Free PMC article.
|
Systematic functional perturbations uncover a prognostic genetic network driving human breast cancer. Tristan Gallenne, Kenneth N Ross, +6 authors, Nils L Visser, Salony, Christophe J Desmet, Ben S Wittner, Lodewyk F A Wessels, Sridhar Ramaswamy, Daniel S Peeper. less Oncotarget, 2017 Apr 16; 8(13). PMID: 28411283 Free PMC article.
|
Current Update of Patient-Derived Xenograft Model for Translational Breast Cancer Research. Tsutomu Kawaguchi, Barbara A Foster, Jessica Young, Kazuaki Takabe. J Mammary Gland Biol Neoplasia, 2017 Apr 30; 22(2). PMID: 28451789 Free PMC article. Review.
|
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer. Woosung Chung, Hye Hyeon Eum, +10 authors, Hae-Ock Lee, Kyung-Min Lee, Han-Byoel Lee, Kyu-Tae Kim, Han Suk Ryu, Sangmin Kim, Jeong Eon Lee, Yeon Hee Park, Zhengyan Kan, Wonshik Han, Woong-Yang Park. less Nat Commun, 2017 May 06; 8. PMID: 28474673 Free PMC article. Highly Cited.
|
Adjuvant endocrine therapy alone in patients with node-positive, luminal A type breast cancer. Sungmin Park, Se Kyung Lee, +7 authors, Hyun-June Paik, Jai Min Ryu, Isaac Kim, Soo Youn Bae, Jonghan Yu, Seok Won Kim, Jeong Eon Lee, Seok Jin Nam. less Medicine (Baltimore), 2017 Jun 01; 96(22). PMID: 28562530 Free PMC article.
|
Clinical use of the Oncotype DX genomic test to guide treatment decisions for patients with invasive breast cancer. Terri P McVeigh, Michael J Kerin. Breast Cancer (Dove Med Press), 2017 Jun 16; 9. PMID: 28615971 Free PMC article. Review.
|
Improved prediction of PARP inhibitor response and identification of synergizing agents through use of a novel gene expression signature generation algorithm. Daniel J McGrail, Curtis Chun-Jen Lin, +11 authors, Jeannine Garnett, Qingxin Liu, Wei Mo, Hui Dai, Yiling Lu, Qinghua Yu, Zhenlin Ju, Jun Yin, Christopher P Vellano, Bryan Hennessy, Gordon B Mills, Shiaw-Yih Lin. less NPJ Syst Biol Appl, 2017 Jun 27; 3. PMID: 28649435 Free PMC article.
|
Prognostic cancer gene signatures share common regulatory motifs. Ying Wang, Steve Goodison, Xiaoman Li, Haiyan Hu. Sci Rep, 2017 Jul 08; 7(1). PMID: 28684851 Free PMC article.
|
21-Gene recurrence score and locoregional recurrence in lymph node-negative, estrogen receptor-positive breast cancer. Gulisa Turashvili, Joanne F Chou, +5 authors, Edi Brogi, Monica Morrow, Maura Dickler, Larry Norton, Clifford Hudis, Hannah Y Wen. less Breast Cancer Res Treat, 2017 Jul 14; 166(1). PMID: 28702894 Free PMC article.
|
Learning from big data: are we undertreating older women with high-risk breast cancer? Joseph A Sparano, Hyman Muss. NPJ Breast Cancer, 2017 Jul 20; 2. PMID: 28721380 Free PMC article.
|
Chemosensitivity to doxorubicin of ER-positive/HER2-negative breast cancers with high 21-gene recurrence score: A study based on in vitro chemoresponse assay. Sung Gwe Ahn, Soong June Bae, +4 authors, Changik Yoon, Yoon Jin Cha, Hak Woo Lee, Seung Ah Lee, Joon Jeong. less PLoS One, 2017 Nov 09; 12(11). PMID: 29117208 Free PMC article.
|
A metastasis biomarker (MetaSite Breast™ Score) is associated with distant recurrence in hormone receptor-positive, HER2-negative early-stage breast cancer. Joseph A Sparano, Robert Gray, +13 authors, Maja H Oktay, David Entenberg, Thomas Rohan, Xiaonan Xue, Michael Donovan, Michael Peterson, Anthony Shuber, Douglas A Hamilton, Timothy D'Alfonso, Lori J Goldstein, Frank Gertler, Nancy E Davidson, John Condeelis, Joan Jones. less NPJ Breast Cancer, 2017 Nov 16; 3. PMID: 29138761 Free PMC article.
|
Single subject transcriptome analysis to identify functionally signed gene set or pathway activity. Joanne Berghout, Qike Li, +2 authors, Nima Pouladi, Jianrong Li, Yves A Lussier. less Pac Symp Biocomput, 2017 Dec 09; 23. PMID: 29218900 Free PMC article.
|
Luminal-like HER2-negative stage IA breast cancer: a multicenter retrospective study on long-term outcome with propensity score analysis. Carmine De Angelis, Massimo Di Maio, +12 authors, Anna Crispo, Mario Giuliano, Francesco Schettini, Marta Bonotto, Lorenzo Gerratana, Donatella Iacono, Marika Cinausero, Ferdinando Riccardi, Giuseppe Ciancia, Michelino De Laurentiis, Fabio Puglisi, Sabino De Placido, Grazia Arpino. less Oncotarget, 2018 Jan 20; 8(68). PMID: 29348868 Free PMC article.
|
Prognostic & predictive factors for planning adjuvant chemotherapy of early-stage breast cancer. Onur Esbah, Berna Oksuzoglu. Indian J Med Res, 2018 Mar 08; 146(5). PMID: 29512598 Free PMC article. Review.
|
Molecular and clinical features of the TP53 signature gene expression profile in early-stage breast cancer. Shigeo Yamaguchi, Shin Takahashi, +8 authors, Kaoru Mogushi, Yuki Izumi, Yumi Nozaki, Tadashi Nomizu, Yoichiro Kakugawa, Takanori Ishida, Noriaki Ohuchi, Chikashi Ishioka, Shunsuke Kato. less Oncotarget, 2018 Mar 28; 9(18). PMID: 29581837 Free PMC article.
|
Practice patterns and outcomes for patients with node-negative hormone receptor-positive breast cancer and intermediate 21-gene Recurrence Scores. Jonathan Chen, Xian Wu, +2 authors, Paul J Christos, Silvia Formenti, Himanshu Nagar. less Breast Cancer Res, 2018 Apr 18; 20(1). PMID: 29661221 Free PMC article.
|
Prognostic gene expression assays in breast cancer: are two better than one? Joseph A Sparano. NPJ Breast Cancer, 2018 May 31; 4. PMID: 29845110 Free PMC article.
|
Quantitative nuclear histomorphometry predicts oncotype DX risk categories for early stage ER+ breast cancer. Jon Whitney, German Corredor, +6 authors, Andrew Janowczyk, Shridar Ganesan, Scott Doyle, John Tomaszewski, Michael Feldman, Hannah Gilmore, Anant Madabhushi. less BMC Cancer, 2018 Jun 01; 18(1). PMID: 29848291 Free PMC article.
|
Adjuvant Chemotherapy Guided by a 21-Gene Expression Assay in Breast Cancer. Joseph A Sparano, Robert J Gray, +27 authors, Della F Makower, Kathleen I Pritchard, Kathy S Albain, Daniel F Hayes, Charles E Geyer, Elizabeth C Dees, Matthew P Goetz, John A Olson, Tracy Lively, Sunil S Badve, Thomas J Saphner, Lynne I Wagner, Timothy J Whelan, Matthew J Ellis, Soonmyung Paik, William C Wood, Peter M Ravdin, Maccon M Keane, Henry L Gomez Moreno, Pavan S Reddy, Timothy F Goggins, Ingrid A Mayer, Adam M Brufsky, Deborah L Toppmeyer, Virginia G Kaklamani, Jeffrey L Berenberg, Jeffrey Abrams, George W Sledge. less N Engl J Med, 2018 Jun 05; 379(2). PMID: 29860917 Free PMC article. Highly Cited.
|
Addressing the challenges of applying precision oncology. Seung Ho Shin, Ann M Bode, Zigang Dong. NPJ Precis Oncol, 2018 Jun 07; 1(1). PMID: 29872710 Free PMC article. Review.
|
Network-Based Predictors of Progression in Head and Neck Squamous Cell Carcinoma. Nasim Sanati, Ovidiu D Iancu, +2 authors, Guanming Wu, James E Jacobs, Shannon K McWeeney. less Front Genet, 2018 Jun 19; 9. PMID: 29910823 Free PMC article.
|
Image analysis with deep learning to predict breast cancer grade, ER status, histologic subtype, and intrinsic subtype. Heather D Couture, Lindsay A Williams, +6 authors, Joseph Geradts, Sarah J Nyante, Ebonee N Butler, J S Marron, Charles M Perou, Melissa A Troester, Marc Niethammer. less NPJ Breast Cancer, 2018 Sep 06; 4. PMID: 30182055 Free PMC article.
|
An assessment of prognostic immunity markers in breast cancer. Benlong Yang, Jeff Chou, +13 authors, Yaozhong Tao, Dengbin Wu, Xinhong Wu, Xueqing Li, Yan Li, Yiwei Chu, Feng Tang, Yanxia Shi, Linlin Ma, Tong Zhou, William Kaufmann, Lisa A Carey, Jiong Wu, Zhiyuan Hu. less NPJ Breast Cancer, 2018 Nov 06; 4. PMID: 30393759 Free PMC article.
|
21-Gene assay as predictor of chemotherapy benefit in HER2-negative breast cancer. Charles E Geyer, Gong Tang, +8 authors, Eleftherios P Mamounas, Priya Rastogi, Soonmyung Paik, Steven Shak, Frederick L Baehner, Michael Crager, D Lawrence Wickerham, Joseph P Costantino, Norman Wolmark. less NPJ Breast Cancer, 2018 Nov 21; 4. PMID: 30456299 Free PMC article.
|
BCT score predicts chemotherapy benefit in Asian patients with hormone receptor-positive, HER2-negative, lymph node-negative breast cancer. Mi Jeong Kwon, Sae Byul Lee, +8 authors, Jinil Han, Jeong Eon Lee, Jong Won Lee, Gyungyub Gong, Peter D Beitsch, Seok Jin Nam, Sei Hyun Ahn, Byung-Ho Nam, Young Kee Shin. less PLoS One, 2018 Nov 22; 13(11). PMID: 30462685 Free PMC article.
|
TAILORx: Questions Answered, Lessons Learned, and Remaining Knowledge Gaps. Joseph A Sparano, Robert Gray. J Clin Oncol, 2019 Jun 08; 37(21). PMID: 31173552 Free PMC article.
|
Clinical Outcomes in Early Breast Cancer With a High 21-Gene Recurrence Score of 26 to 100 Assigned to Adjuvant Chemotherapy Plus Endocrine Therapy: A Secondary Analysis of the TAILORx Randomized Clinical Trial. Joseph A Sparano, Robert J Gray, +26 authors, Della F Makower, Kathy S Albain, Thomas J Saphner, Sunil S Badve, Lynne I Wagner, Virginia G Kaklamani, Maccon M Keane, Henry L Gomez, Pavan S Reddy, Timothy F Goggins, Ingrid A Mayer, Deborah L Toppmeyer, Adam M Brufsky, Matthew P Goetz, Jeffrey L Berenberg, Catalin Mahalcioiu, Christine Desbiens, Daniel F Hayes, Elizabeth C Dees, Charles E Geyer, John A Olson, William C Wood, Tracy Lively, Soonmyung Paik, Matthew J Ellis, Jeffrey Abrams, George W Sledge. less JAMA Oncol, 2019 Oct 01; 6(3). PMID: 31566680 Free PMC article.
|
Oncotype DX recurrence score implications for disparities in chemotherapy and breast cancer mortality in Georgia. Lindsay J Collin, Ming Yan, +8 authors, Renjian Jiang, Kevin C Ward, Brittany Crawford, Mylin A Torres, Keerthi Gogineni, Preeti D Subhedar, Samantha Puvanesarajah, Mia M Gaudet, Lauren E McCullough. less NPJ Breast Cancer, 2019 Oct 05; 5. PMID: 31583272 Free PMC article.
|
Decision of Adjuvant Systemic Treatment in HR+ HER2- Early Invasive Breast Cancer: Which Biomarkers Could Help? Marie Alexandre, Aurélie Maran-Gonzalez, +6 authors, Marie Viala, Nelly Firmin, Véronique D'Hondt, Marian Gutowski, Céline Bourgier, William Jacot, Séverine Guiu. less Cancer Manag Res, 2019 Dec 19; 11. PMID: 31849525 Free PMC article. Review.
|
Patient similarity by joint matrix trifactorization to identify subgroups in acute myeloid leukemia. F Vitali, S Marini, +4 authors, D Pala, A Demartini, S Montoli, A Zambelli, R Bellazzi. less JAMIA Open, 2018 May 14; 1(1). PMID: 31984320 Free PMC article.
|
Opportunities for Patient Matching Algorithms to Improve Patient Care in Oncology. Travis Johnson, David Liebner, James L Chen. JCO Clin Cancer Inform, 2017 Nov 01; 1. PMID: 30657369 Free PMC article.
|
Clinical and Genomic Risk to Guide the Use of Adjuvant Therapy for Breast Cancer. Joseph A Sparano, Robert J Gray, +27 authors, Peter M Ravdin, Della F Makower, Kathleen I Pritchard, Kathy S Albain, Daniel F Hayes, Charles E Geyer, Elizabeth C Dees, Matthew P Goetz, John A Olson, Tracy Lively, Sunil S Badve, Thomas J Saphner, Lynne I Wagner, Timothy J Whelan, Matthew J Ellis, Soonmyung Paik, William C Wood, Maccon M Keane, Henry L Gomez Moreno, Pavan S Reddy, Timothy F Goggins, Ingrid A Mayer, Adam M Brufsky, Deborah L Toppmeyer, Virginia G Kaklamani, Jeffrey L Berenberg, Jeffrey Abrams, George W Sledge. less N Engl J Med, 2019 Jun 04; 380(25). PMID: 31157962 Free PMC article. Highly Cited.
|
Developing a 'personalome' for precision medicine: emerging methods that compute interpretable effect sizes from single-subject transcriptomes. Francesca Vitali, Qike Li, +3 authors, A Grant Schissler, Joanne Berghout, Colleen Kenost, Yves A Lussier. less Brief Bioinform, 2017 Dec 23; 20(3). PMID: 29272327 Free PMC article. Review.
|
Association of Circulating Tumor Cells With Late Recurrence of Estrogen Receptor-Positive Breast Cancer: A Secondary Analysis of a Randomized Clinical Trial. Joseph Sparano, Anne O'Neill, +5 authors, Katherine Alpaugh, Antonio C Wolff, Donald W Northfelt, Chau T Dang, George W Sledge, Kathy D Miller. less JAMA Oncol, 2018 Jul 29; 4(12). PMID: 30054636 Free PMC article. Highly Cited.
|
Community clinical practice patterns and mortality in patients with intermediate oncotype DX recurrence scores: Who benefits from chemotherapy? Abiola F Ibraheem, David J Press, Olufunmilayo I Olopade, Dezheng Huo. Cancer, 2018 Nov 06; 125(2). PMID: 30387876 Free PMC article.
|
A Multigene Assay Determines Risk of Recurrence in Patients with Triple-Negative Breast Cancer. Rachel L Stewart, Katherine L Updike, +4 authors, Rachel E Factor, N Lynn Henry, Kenneth M Boucher, Philip S Bernard, Katherine E Varley. less Cancer Res, 2019 May 03; 79(13). PMID: 31048497 Free PMC article.
|
The impact of Oncotype DX breast cancer assay results on clinical practice: a UK experience. Valerie E Crolley, Husam Marashi, +12 authors, Shabbir Rawther, Bhawna Sirohi, Marina Parton, Janine Graham, Anup Vinayan, Stephanie Sutherland, Anne Rigg, Anshu Wadhawan, Catherine Harper-Wynne, Emma Spurrell, Hannah Bond, Fharat Raja, Judy King. less Breast Cancer Res Treat, 2020 Mar 15; 180(3). PMID: 32170635 Free PMC article.
|
The Correlation of Magee EquationsTM and Oncotype DX® Recurrence Score From Core Needle Biopsy Tissues in Predicting Response to Neoadjuvant Chemotherapy in ER+ and HER2- Breast Cancer. Atilla Soran, Kaori Tane, Efe Sezgin, Rohit Bhargava. Eur J Breast Health, 2020 Apr 15; 16(2). PMID: 32285033 Free PMC article.
|
The Evaluation of Magee Equation 2 in Predicting Response and Outcome in Hormone Receptor-Positive and HER2-Negative Breast Cancer Patients Receiving Neoadjuvant Chemotherapy. Napat Saigosoom, Doonyapat Sa-Nguanraksa, +2 authors, Eng O-Charoenrat, Thanawat Thumrongtaradol, Pornchai O-Charoenrat. less Cancer Manag Res, 2020 Apr 21; 12. PMID: 32308485 Free PMC article.
|
Simulation Modeling to Extend Clinical Trials of Adjuvant Chemotherapy Guided by a 21-Gene Expression Assay in Early Breast Cancer. Jinani Jayasekera, Joseph A Sparano, +5 authors, Robert Gray, Claudine Isaacs, Allison Kurian, Suzanne O'Neill, Clyde B Schechter, Jeanne Mandelblatt. less JNCI Cancer Spectr, 2020 Apr 28; 3(4). PMID: 32337487 Free PMC article.
|
DGM-CM6: A New Model to Predict Distant Recurrence Risk in Operable Endocrine-Responsive Breast Cancer. Lei Lei, Xiao-Jia Wang, +2 authors, Yin-Yuan Mo, Skye Hung-Chun Cheng, Yunyun Zhou. less Front Oncol, 2020 Jun 13; 10. PMID: 32528885 Free PMC article.
|
Radiogenomics of magnetic resonance imaging and a new multi-gene classifier for predicting recurrence prognosis in estrogen receptor-positive breast cancer: A preliminary study. Yukiko Tokuda, Masahiro Yanagawa, +3 authors, Kaori Minamitani, Yasuto Naoi, Shinzaburo Noguchi, Noriyuki Tomiyama. less Medicine (Baltimore), 2020 Apr 22; 99(16). PMID: 32311939 Free PMC article.
|
Distribution of the 21-Gene Breast Recurrence Score in Patients with Primary Breast Cancer in Germany. Vincent P Walter, Florin-Andrei Taran, +6 authors, Markus Wallwiener, Armin Bauer, Eva-Maria Grischke, Christina Barbara Walter, Markus Hahn, Sara Y Brucker, Andreas Daniel Hartkopf. less Geburtshilfe Frauenheilkd, 2020 Jun 23; 80(6). PMID: 32565552 Free PMC article.
|
Chemotherapy benefit for 'ER-positive' breast cancer and contamination of nonluminal subtypes—waiting for TAILORx and RxPONDER. Z Sun, A Prat, +2 authors, M C U Cheang, R D Gelber, C M Perou. less Ann Oncol, 2014 Oct 31; 26(1). PMID: 25355719 Free PMC article.
|
Sex Disparity Observed for Oncotype DX Breast Recurrence Score in Predicting Mortality Among Patients with Early Stage ER-Positive Breast Cancer. Fei Wang, Sonya Reid, +6 authors, Wei Zheng, Tuya Pal, Ingrid Meszoely, Ingrid A Mayer, Christina E Bailey, Ben Ho Park, Xiao-Ou Shu. less Clin Cancer Res, 2019 Nov 22; 26(1). PMID: 31748278 Free PMC article.
|
High Levels of Chromosomal Copy Number Alterations and TP53 Mutations Correlate with Poor Outcome in Younger Breast Cancer Patients. Ayla Koçak, Kerstin Heselmeyer-Haddad, +13 authors, Annette Lischka, Daniela Hirsch, David Fiedler, Yue Hu, Natalie Doberstein, Irianna Torres, Wei-Dong Chen, E Michael Gertz, Alejandro A Schäffer, Sandra Freitag-Wolf, Jutta Kirfel, Gert Auer, Jens K Habermann, Thomas Ried. less Am J Pathol, 2020 May 18; 190(8). PMID: 32416097 Free PMC article.
|
The 21-Gene Recurrence Score Assay and Prediction of Chemotherapy Benefit: A Propensity Score-Matched Analysis of the SEER Database. In Sil Choi, Jiwoong Jung, +5 authors, Byoung Hyuck Kim, Sohee Oh, Jongjin Kim, Jin Hyun Park, Jeong Hwan Park, Ki-Tae Hwang. less Cancers (Basel), 2020 Jul 12; 12(7). PMID: 32650374 Free PMC article.
|
Discordance in 21-gene recurrence scores between paired breast cancer samples is inversely associated with patient age. Sarah M Bernhardt, Pallave Dasari, +6 authors, Joseph Wrin, Wendy Raymond, Suzanne Edwards, David Walsh, Amanda R Townsend, Timothy J Price, Wendy V Ingman. less Breast Cancer Res, 2020 Aug 20; 22(1). PMID: 32811558 Free PMC article.
|
Exploratory Analysis of Single-Gene Predictive Biomarkers in HERA DASL Cohort Reveals That C8A mRNA Expression Is Prognostic of Outcome and Predictive of Benefit of Trastuzumab. Scooter Willis, Varvara Polydoropoulou, +13 authors, Yuliang Sun, Brandon Young, Zoi Tsourti, Dimitris Karlis, Bradley Long, Xiaoqian Lin, Stephanie Theel, Jennifer Carlson, Balazs Győrffy, Casey Williams, Mark Abramovitz, Urania Dafni, Mitch Dowsett, Brian Leyland-Jones. less JCO Precis Oncol, 2018 Nov 01; 2. PMID: 32913993 Free PMC article.
|
The Oncotype Dx Assay in ER-Positive, HER2-Negative Breast Cancer Patients: A Real Life Experience from a Single Cancer Center. Stephane Thibodeau, Ioannis A Voutsadakis. Eur J Breast Health, 2019 Jul 18; 15(3). PMID: 31312792 Free PMC article.
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Comparison of GenesWell BCT Score With Oncotype DX Recurrence Score for Risk Classification in Asian Women With Hormone Receptor-Positive, HER2-Negative Early Breast Cancer. Mi Jeong Kwon, Jeong Eon Lee, +12 authors, Joon Jeong, Sang Uk Woo, Jinil Han, Byeong-Il Kang, Jee-Eun Kim, Youngho Moon, Sae Byul Lee, Seonghoon Lee, Yoon-La Choi, Youngmi Kwon, Kyoung Song, Gyungyub Gong, Young Kee Shin. less Front Oncol, 2019 Aug 14; 9. PMID: 31404265 Free PMC article.
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Future perspectives of surgical treatment of breast cancer. Margit Riis. Ann Med Surg (Lond), 2020 Oct 03; 59. PMID: 33005399 Free PMC article.
|
Patient and physician factors associated with Oncotype DX and adjuvant chemotherapy utilization for breast cancer patients in New Hampshire, 2010-2016. Thomas M Schwedhelm, Judy R Rees, +4 authors, Tracy Onega, Ronnie J Zipkin, Andrew Schaefer, Maria O Celaya, Erika L Moen. less BMC Cancer, 2020 Sep 05; 20(1). PMID: 32883270 Free PMC article.
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Biobanking for Cancer Biomarker Research: Issues and Solutions. Lise A Matzke, Peter H Watson. Biomark Insights, 2020 Nov 17; 15. PMID: 33192050 Free PMC article. Review.
|
Multifocal/Multicentric Ipsilateral Invasive Breast Carcinomas with Similar Histology: Is Multigene Testing of All Individual Foci Necessary? Anne Grabenstetter, Edi Brogi, +4 authors, Joanne F Chou, Monica Morrow, Maura Dickler, Larry Norton, Hannah Y Wen. less Ann Surg Oncol, 2018 Oct 10; 26(2). PMID: 30298311 Free PMC article.
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A Nomogram for Predicting the Oncotype DX Recurrence Score in Women with T1-3N0-1miM0 Hormone Receptor‒Positive, Human Epidermal Growth Factor 2 (HER2)‒Negative Breast Cancer. Sae Byul Lee, Junetae Kim, +8 authors, Guiyun Sohn, Jisun Kim, Il Yong Chung, Hee Jeong Kim, Beom Seok Ko, Byung Ho Son, Sei-Hyun Ahn, Jong Won Lee, Kyung Hae Jung. less Cancer Res Treat, 2018 Nov 06; 51(3). PMID: 30384581 Free PMC article.
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Impact of Commercialized Genomic Tests on Adjuvant Treatment Decisions in Early Stage Breast Cancer Patients. Hazem I Assi, Ibrahim A Alameh, +9 authors, Jessica Khoury, Nour Abdul Halim, Fadi El Karak, Fadi Farhat, Juliett Berro, Eman Sbaity, Maya Charafeddine, Arafat Tfayli, Ziad Salem, Nagi El Saghir. less J Oncol, 2020 Dec 15; 2020. PMID: 33312202 Free PMC article.
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Concordance of the 21-gene assay between core needle biopsy and resection specimens in early breast cancer patients. Peng Qi, Yu Yang, +5 authors, Qian-Ming Bai, Tian Xue, Min Ren, Qian-Lan Yao, Wen-Tao Yang, Xiao-Yan Zhou. less Breast Cancer Res Treat, 2021 Jan 14;. PMID: 33439420 Free PMC article.
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