Breast cancer subtype intertumor heterogeneity: MRI-based features predict results of a genomic assay. Elizabeth J Sutton, Jung Hun Oh, +5 authors, Brittany Z Dashevsky, Harini Veeraraghavan, Aditya P Apte, Sunitha B Thakur, Joseph O Deasy, Elizabeth A Morris. less J Magn Reson Imaging, 2015 Apr 09; 42(5). PMID: 25850931 Free PMC article. Highly Cited.
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Breast DCE-MRI Kinetic Heterogeneity Tumor Markers: Preliminary Associations With Neoadjuvant Chemotherapy Response. Ahmed Ashraf, Bilwaj Gaonkar, +4 authors, Carolyn Mies, Angela DeMichele, Mark Rosen, Christos Davatzikos, Despina Kontos. less Transl Oncol, 2015 Jun 10; 8(3). PMID: 26055172 Free PMC article.
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Integration and comparison of different genomic data for outcome prediction in cancer. Hugo Gómez-Rueda, Emmanuel Martínez-Ledesma, +2 authors, Antonio Martínez-Torteya, Rebeca Palacios-Corona, Victor Trevino. less BioData Min, 2015 Oct 31; 8. PMID: 26516350 Free PMC article.
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Using computer-extracted image phenotypes from tumors on breast magnetic resonance imaging to predict breast cancer pathologic stage. Elizabeth S Burnside, Karen Drukker, +17 authors, Hui Li, Ermelinda Bonaccio, Margarita Zuley, Marie Ganott, Jose M Net, Elizabeth J Sutton, Kathleen R Brandt, Gary J Whitman, Suzanne D Conzen, Li Lan, Yuan Ji, Yitan Zhu, Carl C Jaffe, Erich P Huang, John B Freymann, Justin S Kirby, Elizabeth A Morris, Maryellen L Giger. less Cancer, 2015 Dec 01; 122(5). PMID: 26619259 Free PMC article.
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Deciphering Genomic Underpinnings of Quantitative MRI-based Radiomic Phenotypes of Invasive Breast Carcinoma. Yitan Zhu, Hui Li, +4 authors, Wentian Guo, Karen Drukker, Li Lan, Maryellen L Giger, Yuan Ji. less Sci Rep, 2015 Dec 08; 5. PMID: 26639025 Free PMC article.
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Breast cancer molecular subtype classifier that incorporates MRI features. Elizabeth J Sutton, Brittany Z Dashevsky, +5 authors, Jung Hun Oh, Harini Veeraraghavan, Aditya P Apte, Sunitha B Thakur, Elizabeth A Morris, Joseph O Deasy. less J Magn Reson Imaging, 2016 Jan 13; 44(1). PMID: 26756416 Free PMC article.
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Imaging genomics in cancer research: limitations and promises. Harrison X Bai, Ashley M Lee, +4 authors, Li Yang, Paul Zhang, Christos Davatzikos, John M Maris, Sharon J Diskin. less Br J Radiol, 2016 Feb 13; 89(1061). PMID: 26864054 Free PMC article. Review.
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A Radio-genomics Approach for Identifying High Risk Estrogen Receptor-positive Breast Cancers on DCE-MRI: Preliminary Results in Predicting OncotypeDX Risk Scores. Tao Wan, B Nicolas Bloch, +5 authors, Donna Plecha, CheryI L Thompson, Hannah Gilmore, Carl Jaffe, Lyndsay Harris, Anant Madabhushi. less Sci Rep, 2016 Feb 19; 6. PMID: 26887643 Free PMC article.
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Relating Doses of Contrast Agent Administered to TIC and Semi-Quantitative Parameters on DCE-MRI: Based on a Murine Breast Tumor Model. Menglin Wu, Li Lu, +4 authors, Qi Zhang, Qi Guo, Feixiang Zhao, Tongwei Li, Xuening Zhang. less PLoS One, 2016 Feb 24; 11(2). PMID: 26901876 Free PMC article.
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How Can Advanced Imaging Be Used to Mitigate Potential Breast Cancer Overdiagnosis? Habib Rahbar, Elizabeth S McDonald, +2 authors, Janie M Lee, Savannah C Partridge, Christoph I Lee. less Acad Radiol, 2016 Mar 28; 23(6). PMID: 27017136 Free PMC article. Review.
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Intratumor partitioning and texture analysis of dynamic contrast-enhanced (DCE)-MRI identifies relevant tumor subregions to predict pathological response of breast cancer to neoadjuvant chemotherapy. Jia Wu, Guanghua Gong, Yi Cui, Ruijiang Li. J Magn Reson Imaging, 2016 Apr 16; 44(5). PMID: 27080586 Free PMC article. Highly Cited.
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MR Imaging Radiomics Signatures for Predicting the Risk of Breast Cancer Recurrence as Given by Research Versions of MammaPrint, Oncotype DX, and PAM50 Gene Assays. Hui Li, Yitan Zhu, +13 authors, Elizabeth S Burnside, Karen Drukker, Katherine A Hoadley, Cheng Fan, Suzanne D Conzen, Gary J Whitman, Elizabeth J Sutton, Jose M Net, Marie Ganott, Erich Huang, Elizabeth A Morris, Charles M Perou, Yuan Ji, Maryellen L Giger. less Radiology, 2016 Oct 19; 281(2). PMID: 27144536 Free PMC article. Highly Cited.
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Association between Ultrasound Features and the 21-Gene Recurrence Score Assays in Patients with Oestrogen Receptor-Positive, HER2-Negative, Invasive Breast Cancer. Eun Young Chae, Woo Kyung Moon, +8 authors, Hak Hee Kim, Won Hwa Kim, Joo Hee Cha, Hee Jung Shin, Woo Jung Choi, Wonshik Han, Dong-Young Noh, Sae Byul Lee, Sei Hyun Ahn. less PLoS One, 2016 Jul 01; 11(6). PMID: 27362843 Free PMC article.
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Breast MRI contrast enhancement kinetics of normal parenchyma correlate with presence of breast cancer. Shandong Wu, Wendie A Berg, +5 authors, Margarita L Zuley, Brenda F Kurland, Rachel C Jankowitz, Robert Nishikawa, David Gur, Jules H Sumkin. less Breast Cancer Res, 2016 Jul 28; 18(1). PMID: 27449059 Free PMC article.
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DCE-MRI, DW-MRI, and MRS in Cancer: Challenges and Advantages of Implementing Qualitative and Quantitative Multi-parametric Imaging in the Clinic. Jessica M Winfield, Geoffrey S Payne, Alex Weller, Nandita M deSouza. Top Magn Reson Imaging, 2016 Oct 18; 25(5). PMID: 27748710 Free PMC article. Review.
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Quantitative MRI radiomics in the prediction of molecular classifications of breast cancer subtypes in the TCGA/TCIA data set. Hui Li, Yitan Zhu, +13 authors, Elizabeth S Burnside, Erich Huang, Karen Drukker, Katherine A Hoadley, Cheng Fan, Suzanne D Conzen, Margarita Zuley, Jose M Net, Elizabeth Sutton, Gary J Whitman, Elizabeth Morris, Charles M Perou, Yuan Ji, Maryellen L Giger. less NPJ Breast Cancer, 2016 Nov 18; 2. PMID: 27853751 Free PMC article. Highly Cited.
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Intravoxel incoherent motion diffusion-weighted MRI during chemoradiation therapy to characterize and monitor treatment response in human papillomavirus head and neck squamous cell carcinoma. Ramesh Paudyal, Jung Hun Oh, +9 authors, Nadeem Riaz, Praveen Venigalla, Jingao Li, Vaios Hatzoglou, Jonathan Leeman, David Aramburu Nunez, Yonggang Lu, Joseph O Deasy, Nancy Lee, Amita Shukla-Dave. less J Magn Reson Imaging, 2016 Nov 20; 45(4). PMID: 27862553 Free PMC article.
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Predictive radiogenomics modeling of EGFR mutation status in lung cancer. Olivier Gevaert, Sebastian Echegaray, +10 authors, Amanda Khuong, Chuong D Hoang, Joseph B Shrager, Kirstin C Jensen, Gerald J Berry, H Henry Guo, Charles Lau, Sylvia K Plevritis, Daniel L Rubin, Sandy Napel, Ann N Leung. less Sci Rep, 2017 Feb 01; 7. PMID: 28139704 Free PMC article. Highly Cited.
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Identifying relations between imaging phenotypes and molecular subtypes of breast cancer: Model discovery and external validation. Jia Wu, Xiaoli Sun, +5 authors, Jeff Wang, Yi Cui, Fumi Kato, Hiroki Shirato, Debra M Ikeda, Ruijiang Li. less J Magn Reson Imaging, 2017 Feb 09; 46(4). PMID: 28177554 Free PMC article.
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Radiogenomics of lower-grade glioma: algorithmically-assessed tumor shape is associated with tumor genomic subtypes and patient outcomes in a multi-institutional study with The Cancer Genome Atlas data. Maciej A Mazurowski, Kal Clark, +3 authors, Nicholas M Czarnek, Parisa Shamsesfandabadi, Katherine B Peters, Ashirbani Saha. less J Neurooncol, 2017 May 05; 133(1). PMID: 28470431
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Primary Rectal Cancer: Repeatability of Global and Local-Regional MR Imaging Texture Features. Sofia Gourtsoyianni, Georgia Doumou, +7 authors, Davide Prezzi, Benjamin Taylor, J James Stirling, N Jane Taylor, Musib Siddique, Gary J R Cook, Robert Glynne-Jones, Vicky Goh. less Radiology, 2017 May 10; 284(2). PMID: 28481194 Free PMC article.
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Apparent diffusion coefficient in estrogen receptor-positive and lymph node-negative invasive breast cancers at 3.0T DW-MRI: A potential predictor for an oncotype Dx test recurrence score. Sunitha B Thakur, Manuela Durando, +5 authors, Soledad Milans, Gene Y Cho, Lucas Gennaro, Elizabeth J Sutton, Dilip Giri, Elizabeth A Morris. less J Magn Reson Imaging, 2017 Jun 24; 47(2). PMID: 28640531 Free PMC article.
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Associations between gene expression profiles of invasive breast cancer and Breast Imaging Reporting and Data System MRI lexicon. Ga Ram Kim, You Jin Ku, +2 authors, Soon Gu Cho, Sei Joong Kim, Byung Soh Min. less Ann Surg Treat Res, 2017 Jul 15; 93(1). PMID: 28706887 Free PMC article.
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Heterogeneous Enhancement Patterns of Tumor-adjacent Parenchyma at MR Imaging Are Associated with Dysregulated Signaling Pathways and Poor Survival in Breast Cancer. Jia Wu, Bailiang Li, +6 authors, Xiaoli Sun, Guohong Cao, Daniel L Rubin, Sandy Napel, Debra M Ikeda, Allison W Kurian, Ruijiang Li. less Radiology, 2017 Jul 15; 285(2). PMID: 28708462 Free PMC article.
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Multiple-response regression analysis links magnetic resonance imaging features to de-regulated protein expression and pathway activity in lower grade glioma. Michael Lehrer, Anindya Bhadra, +9 authors, Visweswaran Ravikumar, James Y Chen, Max Wintermark, Scott N Hwang, Chad A Holder, Erich P Huang, Brenda Fevrier-Sullivan, John B Freymann, Arvind Rao, TCGA Glioma Phenotype Research Group. less Oncoscience, 2017 Aug 07; 4(5-6). PMID: 28781988 Free PMC article.
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Background, current role, and potential applications of radiogenomics. Katja Pinker, Fuki Shitano, +6 authors, Evis Sala, Richard K Do, Robert J Young, Andreas G Wibmer, Hedvig Hricak, Elizabeth J Sutton, Elizabeth A Morris. less J Magn Reson Imaging, 2017 Nov 03; 47(3). PMID: 29095543 Free PMC article. Highly Cited. Review.
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Diffusion-weighted MRI characteristics associated with prognostic pathological factors and recurrence risk in invasive ER+/HER2- breast cancers. Nita Amornsiripanitch, Vicky T Nguyen, +4 authors, Habib Rahbar, Daniel S Hippe, Vijayakrishna K Gadi, Mara H Rendi, Savannah C Partridge. less J Magn Reson Imaging, 2017 Nov 28; 48(1). PMID: 29178616 Free PMC article.
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Clinical role of breast MRI now and going forward. D Leithner, G J Wengert, +4 authors, T H Helbich, S Thakur, R E Ochoa-Albiztegui, E A Morris, K Pinker. less Clin Radiol, 2017 Dec 13; 73(8). PMID: 29229179 Free PMC article. Review.
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MRI features predictive of negative surgical margins in patients with HER2 overexpressing breast cancer undergoing breast conservation. Brittany Z Dashevsky, Jung Hun Oh, +4 authors, Aditya P Apte, Blanca Bernard-Davila, Elizabeth A Morris, Joseph O Deasy, Elizabeth J Sutton. less Sci Rep, 2018 Jan 13; 8(1). PMID: 29321645 Free PMC article.
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Cancer imaging phenomics toolkit: quantitative imaging analytics for precision diagnostics and predictive modeling of clinical outcome. Christos Davatzikos, Saima Rathore, +22 authors, Spyridon Bakas, Sarthak Pati, Mark Bergman, Ratheesh Kalarot, Patmaa Sridharan, Aimilia Gastounioti, Nariman Jahani, Eric Cohen, Hamed Akbari, Birkan Tunc, Jimit Doshi, Drew Parker, Michael Hsieh, Aristeidis Sotiras, Hongming Li, Yangming Ou, Robert K Doot, Michel Bilello, Yong Fan, Russell T Shinohara, Paul Yushkevich, Ragini Verma, Despina Kontos. less J Med Imaging (Bellingham), 2018 Jan 18; 5(1). PMID: 29340286 Free PMC article. Highly Cited.
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Radiomics and radiogenomics for precision radiotherapy. Jia Wu, Khin Khin Tha, Lei Xing, Ruijiang Li. J Radiat Res, 2018 Feb 01; 59(suppl_1). PMID: 29385618 Free PMC article.
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A study of association of Oncotype DX recurrence score with DCE-MRI characteristics using multivariate machine learning models. Ashirbani Saha, Michael R Harowicz, Weiyao Wang, Maciej A Mazurowski. J Cancer Res Clin Oncol, 2018 Feb 11; 144(5). PMID: 29427210 Free PMC article.
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Appearance Constrained Semi-Automatic Segmentation from DCE-MRI is Reproducible and Feasible for Breast Cancer Radiomics: A Feasibility Study. Harini Veeraraghavan, Brittany Z Dashevsky, +4 authors, Natsuko Onishi, Meredith Sadinski, Elizabeth Morris, Joseph O Deasy, Elizabeth J Sutton. less Sci Rep, 2018 Mar 21; 8(1). PMID: 29556054 Free PMC article.
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Radiogenomics analysis identifies correlations of digital mammography with clinical molecular signatures in breast cancer. Jose-Gerardo Tamez-Peña, Juan-Andrés Rodriguez-Rojas, +6 authors, Hugo Gomez-Rueda, Jose-Maria Celaya-Padilla, Roxana-Alicia Rivera-Prieto, Rebeca Palacios-Corona, Margarita Garza-Montemayor, Servando Cardona-Huerta, Victor Treviño. less PLoS One, 2018 Mar 30; 13(3). PMID: 29596496 Free PMC article.
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Intratumoral Spatial Heterogeneity at Perfusion MR Imaging Predicts Recurrence-free Survival in Locally Advanced Breast Cancer Treated with Neoadjuvant Chemotherapy. Jia Wu, Guohong Cao, +6 authors, Xiaoli Sun, Juheon Lee, Daniel L Rubin, Sandy Napel, Allison W Kurian, Bruce L Daniel, Ruijiang Li. less Radiology, 2018 May 02; 288(1). PMID: 29714680 Free PMC article. Highly Cited.
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Non-invasive tumor genotyping using radiogenomic biomarkers, a systematic review and oncology-wide pathway analysis. Robin W Jansen, Paul van Amstel, +10 authors, Roland M Martens, Irsan E Kooi, Pieter Wesseling, Adrianus J de Langen, Catharina W Menke-Van der Houven van Oordt, Bernard H E Jansen, Annette C Moll, Josephine C Dorsman, Jonas A Castelijns, Pim de Graaf, Marcus C de Jong. less Oncotarget, 2018 May 08; 9(28). PMID: 29732009 Free PMC article. Review.
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Imaging and the completion of the omics paradigm in breast cancer. D Leithner, J V Horvat, +5 authors, R E Ochoa-Albiztegui, S Thakur, G Wengert, E A Morris, T H Helbich, K Pinker. less Radiologe, 2018 Jun 28; 58(Suppl 1). PMID: 29947931 Free PMC article. Review.
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Magnetic resonance imaging and molecular features associated with tumor-infiltrating lymphocytes in breast cancer. Jia Wu, Xuejie Li, +4 authors, Xiaodong Teng, Daniel L Rubin, Sandy Napel, Bruce L Daniel, Ruijiang Li. less Breast Cancer Res, 2018 Sep 05; 20(1). PMID: 30176944 Free PMC article.
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Effects of MRI scanner parameters on breast cancer radiomics. Ashirbani Saha, Xiaozhi Yu, Dushyant Sahoo, Maciej A Mazurowski. Expert Syst Appl, 2018 Oct 16; 87. PMID: 30319179 Free PMC article.
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Precision diagnostics based on machine learning-derived imaging signatures. Christos Davatzikos, Aristeidis Sotiras, +7 authors, Yong Fan, Mohamad Habes, Guray Erus, Saima Rathore, Spyridon Bakas, Rhea Chitalia, Aimilia Gastounioti, Despina Kontos. less Magn Reson Imaging, 2019 May 10; 64. PMID: 31071473 Free PMC article. Review.
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Combining molecular and imaging metrics in cancer: radiogenomics. Roberto Lo Gullo, Isaac Daimiel, Elizabeth A Morris, Katja Pinker. Insights Imaging, 2020 Jan 05; 11(1). PMID: 31901171 Free PMC article. Review.
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Imaging Phenotypes of Breast Cancer Heterogeneity in Preoperative Breast Dynamic Contrast Enhanced Magnetic Resonance Imaging (DCE-MRI) Scans Predict 10-Year Recurrence. Rhea D Chitalia, Jennifer Rowland, +7 authors, Elizabeth S McDonald, Lauren Pantalone, Eric A Cohen, Aimilia Gastounioti, Michael Feldman, Mitchell Schnall, Emily Conant, Despina Kontos. less Clin Cancer Res, 2019 Nov 17; 26(4). PMID: 31732521 Free PMC article.
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Predicting Breast Cancer Molecular Subtype with MRI Dataset Utilizing Convolutional Neural Network Algorithm. Richard Ha, Simukayi Mutasa, +7 authors, Jenika Karcich, Nishant Gupta, Eduardo Pascual Van Sant, John Nemer, Mary Sun, Peter Chang, Michael Z Liu, Sachin Jambawalikar. less J Digit Imaging, 2019 Feb 02; 32(2). PMID: 30706213 Free PMC article.
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Machine learning in breast MRI. Beatriu Reig, Laura Heacock, Krzysztof J Geras, Linda Moy. J Magn Reson Imaging, 2019 Jul 06; 52(4). PMID: 31276247 Free PMC article. Review.
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Association of distant recurrence-free survival with algorithmically extracted MRI characteristics in breast cancer. Maciej A Mazurowski, Ashirbani Saha, +3 authors, Michael R Harowicz, Elizabeth Hope Cain, Jeffrey R Marks, P Kelly Marcom. less J Magn Reson Imaging, 2019 Jan 24; 49(7). PMID: 30672045 Free PMC article.
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Radiogenomics of magnetic resonance imaging and a new multi-gene classifier for predicting recurrence prognosis in estrogen receptor-positive breast cancer: A preliminary study. Yukiko Tokuda, Masahiro Yanagawa, +3 authors, Kaori Minamitani, Yasuto Naoi, Shinzaburo Noguchi, Noriyuki Tomiyama. less Medicine (Baltimore), 2020 Apr 22; 99(16). PMID: 32311939 Free PMC article.
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A rapid volume of interest-based approach of radiomics analysis of breast MRI for tumor decoding and phenotyping of breast cancer. Aydin Demircioglu, Johannes Grueneisen, +7 authors, Marc Ingenwerth, Oliver Hoffmann, Katja Pinker-Domenig, Elizabeth Morris, Johannes Haubold, Michael Forsting, Felix Nensa, Lale Umutlu. less PLoS One, 2020 Jun 27; 15(6). PMID: 32589681 Free PMC article.
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Dual-mode ultrasound radiomics and intrinsic imaging phenotypes for diagnosis of lymph node lesions. Ying Chen, Jianwei Jiang, +4 authors, Jie Shi, Wanying Chang, Jun Shi, Man Chen, Qi Zhang. less Ann Transl Med, 2020 Jul 11; 8(12). PMID: 32647667 Free PMC article.
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Integrative radiogenomics for virtual biopsy and treatment monitoring in ovarian cancer. Paula Martin-Gonzalez, Mireia Crispin-Ortuzar, +9 authors, Leonardo Rundo, Maria Delgado-Ortet, Marika Reinius, Lucian Beer, Ramona Woitek, Stephan Ursprung, Helen Addley, James D Brenton, Florian Markowetz, Evis Sala. less Insights Imaging, 2020 Aug 18; 11(1). PMID: 32804260 Free PMC article. Review.
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Relationships Between Human-Extracted MRI Tumor Phenotypes of Breast Cancer and Clinical Prognostic Indicators Including Receptor Status and Molecular Subtype. Jose M Net, Gary J Whitman, +7 authors, Elizabteh Morris, Kathleen R Brandt, Elizabeth S Burnside, Maryellen L Giger, Marie Ganott, Elizabeth J Sutton, Margarita L Zuley, Arvind Rao. less Curr Probl Diagn Radiol, 2018 Oct 03; 48(5). PMID: 30270031 Free PMC article.
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Breast cancer MRI radiomics: An overview of algorithmic features and impact of inter-reader variability in annotating tumors. Ashirbani Saha, Michael R Harowicz, Maciej A Mazurowski. Med Phys, 2018 Apr 18; 45(7). PMID: 29663411 Free PMC article.
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A machine learning approach to radiogenomics of breast cancer: a study of 922 subjects and 529 DCE-MRI features. Ashirbani Saha, Michael R Harowicz, +4 authors, Lars J Grimm, Connie E Kim, Sujata V Ghate, Ruth Walsh, Maciej A Mazurowski. less Br J Cancer, 2018 Jul 24; 119(4). PMID: 30033447 Free PMC article.
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Radiomics signature on 3T dynamic contrast-enhanced magnetic resonance imaging for estrogen receptor-positive invasive breast cancers: Preliminary results for correlation with Oncotype DX recurrence scores. Kyung Jin Nam, Hyunjin Park, +3 authors, Eun Sook Ko, Yaeji Lim, Hwan-Ho Cho, Jeong Eon Lee. less Medicine (Baltimore), 2019 Jun 07; 98(23). PMID: 31169691 Free PMC article.
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Radiogenomics of breast cancer using dynamic contrast enhanced MRI and gene expression profiling. Albert C Yeh, Hui Li, +14 authors, Yitan Zhu, Jing Zhang, Galina Khramtsova, Karen Drukker, Alexandra Edwards, Stephanie McGregor, Toshio Yoshimatsu, Yonglan Zheng, Qun Niu, Hiroyuki Abe, Jeffrey Mueller, Suzanne Conzen, Yuan Ji, Maryellen L Giger, Olufunmilayo I Olopade. less Cancer Imaging, 2019 Jul 17; 19(1). PMID: 31307537 Free PMC article.
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[Multimodal, multiparametric and genetic breast imaging]. Roberto LoGullo, Joao Horvat, Jeffrey Reiner, Katja Pinker. Radiologe, 2021 Jan 20; 61(2). PMID: 33464404 Review.
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